IL_7SS9_186

3D structure

PDB id

7SS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G partially dissociated (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUGAA*UACUCC

Length

11 nucleotides

Bulged bases

7SS9|1|1|U|2068, 7SS9|1|1|A|2439

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SS9|1|1|G|2067
7SS9|1|1|U|2068
7SS9|1|1|G|2069
7SS9|1|1|A|2070
7SS9|1|1|A|2071
*
7SS9|1|1|U|2438
7SS9|1|1|A|2439
7SS9|1|1|C|2440
7SS9|1|1|U|2441
7SS9|1|1|C|2442
7SS9|1|1|C|2443

Current chains

Chain 1

23S rRNA

Nearby chains

Chain 5

Transfer RNA; tRNA

Chain b

50S ribosomal protein L2

Chain d

50S ribosomal protein L4

Chain l

50S ribosomal protein L15