IL_7SS9_210

3D structure

PDB id

7SS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G partially dissociated (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CAUACAAAG*CAUAAAGUG

Length

18 nucleotides

Bulged bases

7SS9|1|3|U|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SS9|1|3|C|1245
7SS9|1|3|A|1246
7SS9|1|3|U|1247
7SS9|1|3|A|1248
7SS9|1|3|C|1249
7SS9|1|3|A|1250
7SS9|1|3|A|1251
7SS9|1|3|A|1252
7SS9|1|3|G|1253
*
7SS9|1|3|C|1284
7SS9|1|3|A|1285
7SS9|1|3|U|1286
7SS9|1|3|A|1287
7SS9|1|3|A|1288
7SS9|1|3|A|1289
7SS9|1|3|G|1290
7SS9|1|3|U|1291
7SS9|1|3|G|1292

Current chains

Chain 3

16S rRNA

Nearby chains

Chain L

30S ribosomal protein S7

Chain N

30S ribosomal protein S9

Chain O

30S ribosomal protein S10

Chain R

30S ribosomal protein S13

Chain S

30S ribosomal protein S14