IL_7SS9_213

3D structure

PDB id

7SS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G partially dissociated (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCGCCC*GUAACAAG

Length

14 nucleotides

Bulged bases

7SS9|1|3|C|1400, 7SS9|1|3|C|1403, 7SS9|1|3|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SS9|1|3|C|1399
7SS9|1|3|C|1400
7SS9|1|3|G|1401
7SS9|1|3|C|1402
7SS9|1|3|C|1403
7SS9|1|3|C|1404
*
7SS9|1|3|G|1497
7SS9|1|3|U|1498
7SS9|1|3|A|1499
7SS9|1|3|A|1500
7SS9|1|3|C|1501
7SS9|1|3|A|1502
7SS9|1|3|A|1503
7SS9|1|3|G|1504

Current chains

Chain 3

16S rRNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain 4

mRNA

Chain 5

Transfer RNA; tRNA

Chain 8

Elongation factor G