IL_7SSD_163

3D structure

PDB id

7SSD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mid translocation intermediate with EF-G bound with GDP (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AUACAAAG*CAUAAAGU

Length

16 nucleotides

Bulged bases

7SSD|1|3|U|1286

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SSD|1|3|A|1246
7SSD|1|3|U|1247
7SSD|1|3|A|1248
7SSD|1|3|C|1249
7SSD|1|3|A|1250
7SSD|1|3|A|1251
7SSD|1|3|A|1252
7SSD|1|3|G|1253
*
7SSD|1|3|C|1284
7SSD|1|3|A|1285
7SSD|1|3|U|1286
7SSD|1|3|A|1287
7SSD|1|3|A|1288
7SSD|1|3|A|1289
7SSD|1|3|G|1290
7SSD|1|3|U|1291

Current chains

Chain 3

16S rRNA

Nearby chains

Chain L

30S ribosomal protein S7

Chain N

30S ribosomal protein S9

Chain O

30S ribosomal protein S10

Chain S

30S ribosomal protein S14