3D structure

PDB id
7SSD (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mid translocation intermediate with EF-G bound with GDP (Structure IV)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
GGAUAACUA*UAGCUAAUAC
Length
19 nucleotides
Bulged bases
7SSD|1|3|U|173
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7SSD|1|3|G|147
7SSD|1|3|G|148
7SSD|1|3|A|149
7SSD|1|3|U|150
7SSD|1|3|A|151
7SSD|1|3|A|152
7SSD|1|3|C|153
7SSD|1|3|U|154
7SSD|1|3|A|155
*
7SSD|1|3|U|166
7SSD|1|3|A|167
7SSD|1|3|G|168
7SSD|1|3|C|169
7SSD|1|3|U|170
7SSD|1|3|A|171
7SSD|1|3|A|172
7SSD|1|3|U|173
7SSD|1|3|A|174
7SSD|1|3|C|175

Current chains

Chain 3
16S rRNA

Nearby chains

Chain Y
30S ribosomal protein S20

Coloring options:

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