IL_7SSD_191
3D structure
- PDB id
- 7SSD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mid translocation intermediate with EF-G bound with GDP (Structure IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUGUAG*CGUAGAGAU
- Length
- 15 nucleotides
- Bulged bases
- 7SSD|1|3|A|702
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SSD_191 not in the Motif Atlas
- Homologous match to IL_6CZR_143
- Geometric discrepancy: 0.2308
- The information below is about IL_6CZR_143
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37722.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7SSD|1|3|G|683
7SSD|1|3|U|684
7SSD|1|3|G|685
7SSD|1|3|U|686
7SSD|1|3|A|687
7SSD|1|3|G|688
*
7SSD|1|3|C|699
7SSD|1|3|G|700
7SSD|1|3|U|701
7SSD|1|3|A|702
7SSD|1|3|G|703
7SSD|1|3|A|704
7SSD|1|3|G|705
7SSD|1|3|A|706
7SSD|1|3|U|707
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain P
- 30S ribosomal protein S11
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