IL_7SSL_010

3D structure

PDB id

7SSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UAG*CAAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SSL_010 not in the Motif Atlas

Homologous match to IL_7RQB_013

Geometric discrepancy: 0.2048

The information below is about IL_7RQB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.1

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

7SSL|1|1|U|293
7SSL|1|1|A|294
7SSL|1|1|G|295
*
7SSL|1|1|C|343
7SSL|1|1|A|344
7SSL|1|1|A|345
7SSL|1|1|A|346
7SSL|1|1|A|347

Current chains

Chain 1

23S rRNA

Nearby chains

Chain u

50S ribosomal protein L24