IL_7SSL_154

3D structure

PDB id

7SSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

7SSL|1|3|U|1049

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SSL_154 not in the Motif Atlas

Homologous match to IL_6CZR_152

Geometric discrepancy: 0.2803

The information below is about IL_6CZR_152

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SSL|1|3|G|1048
7SSL|1|3|U|1049
7SSL|1|3|G|1050
*
7SSL|1|3|C|1208
7SSL|1|3|C|1209

Current chains

Chain 3

16S rRNA

Nearby chains

Chain 8

Elongation factor G

Chain S

30S ribosomal protein S14