IL_7SSL_180

3D structure

PDB id

7SSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCCAGACAGCCAG*CUGGUCGAG

Length

22 nucleotides

Bulged bases

7SSL|1|1|A|1046, 7SSL|1|1|U|1105

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SSL|1|1|C|1043
7SSL|1|1|C|1044
7SSL|1|1|C|1045
7SSL|1|1|A|1046
7SSL|1|1|G|1047
7SSL|1|1|A|1048
7SSL|1|1|C|1049
7SSL|1|1|A|1050
7SSL|1|1|G|1051
7SSL|1|1|C|1052
7SSL|1|1|C|1053
7SSL|1|1|A|1054
7SSL|1|1|G|1055
*
7SSL|1|1|C|1104
7SSL|1|1|U|1105
7SSL|1|1|G|1106
7SSL|1|1|G|1107
7SSL|1|1|U|1108
7SSL|1|1|C|1109
7SSL|1|1|G|1110
7SSL|1|1|A|1111
7SSL|1|1|G|1112

Current chains

Chain 1

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L36

Chain f

50S ribosomal protein L6

Chain i

50S ribosomal protein L11