IL_7SSL_201
3D structure
- PDB id
- 7SSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAAGUU*AAUGUGCCUUCGGGAAC
- Length
- 23 nucleotides
- Bulged bases
- 7SSL|1|3|U|1030, 7SSL|1|3|C|1031, 7SSL|1|3|G|1032
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SSL_201 not in the Motif Atlas
- Homologous match to IL_5J7L_045
- Geometric discrepancy: 0.5423
- The information below is about IL_5J7L_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_13394.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R
- Number of instances in this motif group
- 1
Unit IDs
7SSL|1|3|G|1003
7SSL|1|3|A|1004
7SSL|1|3|A|1005
7SSL|1|3|G|1006
7SSL|1|3|U|1007
7SSL|1|3|U|1008
*
7SSL|1|3|A|1021
7SSL|1|3|A|1022
7SSL|1|3|U|1023
7SSL|1|3|G|1024
7SSL|1|3|U|1025
7SSL|1|3|G|1026
7SSL|1|3|C|1027
7SSL|1|3|C|1028
7SSL|1|3|U|1029
7SSL|1|3|U|1030
7SSL|1|3|C|1031
7SSL|1|3|G|1032
7SSL|1|3|G|1033
7SSL|1|3|G|1034
7SSL|1|3|A|1035
7SSL|1|3|A|1036
7SSL|1|3|C|1037
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain S
- 30S ribosomal protein S14
Coloring options: