IL_7SSN_017

3D structure

PDB id

7SSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GC*GAC

Length

5 nucleotides

Bulged bases

7SSN|1|1|A|764

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SSN_017 not in the Motif Atlas

Homologous match to IL_7RQB_019

Geometric discrepancy: 0.112

The information below is about IL_7RQB_019

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_37497.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

118

Unit IDs

7SSN|1|1|G|697
7SSN|1|1|C|698
*
7SSN|1|1|G|763
7SSN|1|1|A|764
7SSN|1|1|C|765

Current chains

Chain 1

23S rRNA

Nearby chains

Chain b

50S ribosomal protein L2