IL_7SSN_172

3D structure

PDB id

7SSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUU*AUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SSN_172 not in the Motif Atlas

Geometric match to IL_6IA2_004

Geometric discrepancy: 0.2042

The information below is about IL_6IA2_004

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

213

Unit IDs

7SSN|1|3|G|1423
7SSN|1|3|U|1424
7SSN|1|3|U|1425
*
7SSN|1|3|A|1476
7SSN|1|3|U|1477
7SSN|1|3|U|1478

Current chains

Chain 3

16S rRNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain k

50S ribosomal protein L14