3D structure

PDB id
7SSN (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UG*UGA
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7SSN_203 not in the Motif Atlas
Geometric match to IL_4WF9_047
Geometric discrepancy: 0.2903
The information below is about IL_4WF9_047
Detailed Annotation
Intercalated cWW
Broad Annotation
Intercalated cWW
Motif group
IL_61702.1
Basepair signature
cWW-L-cWW
Number of instances in this motif group
6

Unit IDs

7SSN|1|3|U|1425
7SSN|1|3|G|1426
*
7SSN|1|3|U|1474
7SSN|1|3|G|1475
7SSN|1|3|A|1476

Current chains

Chain 3
16S rRNA

Nearby chains

Chain 1
Large subunit ribosomal RNA; LSU rRNA

Coloring options:


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