IL_7SSN_203

3D structure

PDB id

7SSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UG*UGA

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SSN_203 not in the Motif Atlas

Geometric match to IL_4WF9_047

Geometric discrepancy: 0.2903

The information below is about IL_4WF9_047

Detailed Annotation

Intercalated cWW

Broad Annotation

Intercalated cWW

Motif group

IL_53541.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

7SSN|1|3|U|1425
7SSN|1|3|G|1426
*
7SSN|1|3|U|1474
7SSN|1|3|G|1475
7SSN|1|3|A|1476

Current chains

Chain 3

16S rRNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA