IL_7SSO_019
3D structure
- PDB id
- 7SSO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SSO_019 not in the Motif Atlas
- Geometric match to IL_4WF9_024
- Geometric discrepancy: 0.0976
- The information below is about IL_4WF9_024
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.1
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
7SSO|1|1|U|703
7SSO|1|1|G|704
7SSO|1|1|A|705
7SSO|1|1|A|706
7SSO|1|1|G|707
*
7SSO|1|1|U|724
7SSO|1|1|G|725
7SSO|1|1|G|726
7SSO|1|1|A|727
7SSO|1|1|G|728
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain b
- 50S ribosomal protein L2
Coloring options: