IL_7SSO_082

3D structure

PDB id

7SSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUGUGUAGGAUAGG*CCCUU

Length

19 nucleotides

Bulged bases

7SSO|1|1|U|2111, 7SSO|1|1|G|2112, 7SSO|1|1|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SSO|1|1|A|2108
7SSO|1|1|U|2109
7SSO|1|1|G|2110
7SSO|1|1|U|2111
7SSO|1|1|G|2112
7SSO|1|1|U|2113
7SSO|1|1|A|2114
7SSO|1|1|G|2115
7SSO|1|1|G|2116
7SSO|1|1|A|2117
7SSO|1|1|U|2118
7SSO|1|1|A|2119
7SSO|1|1|G|2120
7SSO|1|1|G|2121
*
7SSO|1|1|C|2177
7SSO|1|1|C|2178
7SSO|1|1|C|2179
7SSO|1|1|U|2180
7SSO|1|1|U|2181

Current chains

Chain 1

23S rRNA

Nearby chains

Chain 6

Transfer RNA; tRNA

Chain L

30S ribosomal protein S7

Chain a

50S ribosomal protein L1