Loop IL_7SSO

3D structure

PDB id: 7SSO (explore in PDB, NAKB, or RNA 3D Hub)
Description: Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

Loop

Sequence: CCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAG*CACUGGUCGAG
Length: 56 nucleotides
Bulged bases: 7SSO|1|1|A|1046, 7SSO|1|1|U|1061, 7SSO|1|1|U|1066, 7SSO|1|1|A|1070, 7SSO|1|1|A|1084, 7SSO|1|1|U|1105
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7SSO|1|1|C|1043
7SSO|1|1|C|1044
7SSO|1|1|C|1045
7SSO|1|1|A|1046
7SSO|1|1|G|1047
7SSO|1|1|A|1048
7SSO|1|1|C|1049
7SSO|1|1|A|1050
7SSO|1|1|G|1051
7SSO|1|1|C|1052
7SSO|1|1|C|1053
7SSO|1|1|A|1054
7SSO|1|1|G|1055
7SSO|1|1|G|1056
7SSO|1|1|A|1057
7SSO|1|1|U|1058
7SSO|1|1|G|1059
7SSO|1|1|U|1060
7SSO|1|1|U|1061
7SSO|1|1|G|1062
7SSO|1|1|G|1063
7SSO|1|1|C|1064
7SSO|1|1|U|1065
7SSO|1|1|U|1066
7SSO|1|1|A|1067
7SSO|1|1|G|1068
7SSO|1|1|A|1069
7SSO|1|1|A|1070
7SSO|1|1|G|1071
7SSO|1|1|C|1072
7SSO|1|1|A|1073
7SSO|1|1|G|1074
7SSO|1|1|C|1075
7SSO|1|1|C|1076
7SSO|1|1|A|1077
7SSO|1|1|U|1078
7SSO|1|1|C|1079
7SSO|1|1|A|1080
7SSO|1|1|U|1081
7SSO|1|1|U|1082
7SSO|1|1|U|1083
7SSO|1|1|A|1084
7SSO|1|1|A|1085
7SSO|1|1|A|1086
7SSO|1|1|G|1087
*
7SSO|1|1|C|1102
7SSO|1|1|A|1103
7SSO|1|1|C|1104
7SSO|1|1|U|1105
7SSO|1|1|G|1106
7SSO|1|1|G|1107
7SSO|1|1|U|1108
7SSO|1|1|C|1109
7SSO|1|1|G|1110
7SSO|1|1|A|1111
7SSO|1|1|G|1112

Current chains

Chain 1: 23S rRNA

Nearby chains

Chain F: 50S ribosomal protein L36
Chain f: 50S ribosomal protein L6
Chain h: 50S ribosomal protein L10
Chain i: 50S ribosomal protein L11
Chain m: 50S ribosomal protein L16

IL_7SSO_177