IL_7SSW_004
3D structure
- PDB id
- 7SSW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late translocation intermediate with EF-G dissociated (Structure VI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 7SSW|1|1|U|100, 7SSW|1|1|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SSW_004 not in the Motif Atlas
- Homologous match to IL_5J7L_248
- Geometric discrepancy: 0.2524
- The information below is about IL_5J7L_248
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37015.1
- Basepair signature
- cWW-tSS-tSS-tHH-L-tHS-L-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
7SSW|1|1|G|81
7SSW|1|1|U|82
7SSW|1|1|A|83
7SSW|1|1|A|84
7SSW|1|1|G|85
*
7SSW|1|1|C|97
7SSW|1|1|G|98
7SSW|1|1|U|99
7SSW|1|1|U|100
7SSW|1|1|A|101
7SSW|1|1|U|102
7SSW|1|1|A|103
7SSW|1|1|A|104
7SSW|1|1|C|105
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain u
- 50S ribosomal protein L24
- Chain y
- 50S ribosomal protein L29
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