IL_7SSW_111

3D structure

PDB id

7SSW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G dissociated (Structure VI)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCUAAC*GGG

Length

9 nucleotides

Bulged bases

7SSW|1|3|C|48, 7SSW|1|3|A|51

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SSW_111 not in the Motif Atlas

Geometric match to IL_2O3X_003

Geometric discrepancy: 0.2208

The information below is about IL_2O3X_003

Detailed Annotation

Decoding loop related

Broad Annotation

Decoding loop related

Motif group

IL_53541.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

7SSW|1|3|C|47
7SSW|1|3|C|48
7SSW|1|3|U|49
7SSW|1|3|A|50
7SSW|1|3|A|51
7SSW|1|3|C|52
*
7SSW|1|3|G|359
7SSW|1|3|G|360
7SSW|1|3|G|361

Current chains

Chain 3

16S rRNA

Nearby chains

Chain Q

30S ribosomal protein S12