IL_7SSW_197

3D structure

PDB id

7SSW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G dissociated (Structure VI)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

7SSW|1|3|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SSW_197 not in the Motif Atlas

Homologous match to IL_6CZR_148

Geometric discrepancy: 0.2742

The information below is about IL_6CZR_148

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.12

Basepair signature

cWW-L-cWW

Number of instances in this motif group

52

Unit IDs

7SSW|1|3|G|925
7SSW|1|3|G|926
7SSW|1|3|G|927
*
7SSW|1|3|U|1390
7SSW|1|3|U|1391

Current chains

Chain 3

16S rRNA

Nearby chains

Chain 4

mRNA

Chain 6

Transfer RNA; tRNA