IL_7ST2_148

3D structure

PDB id

7ST2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAAAC*GGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ST2_148 not in the Motif Atlas

Homologous match to IL_5J7L_037

Geometric discrepancy: 0.0652

The information below is about IL_5J7L_037

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

7ST2|1|3|C|779
7ST2|1|3|A|780
7ST2|1|3|A|781
7ST2|1|3|A|782
7ST2|1|3|C|783
*
7ST2|1|3|G|799
7ST2|1|3|G|800
7ST2|1|3|U|801
7ST2|1|3|A|802
7ST2|1|3|G|803

Current chains

Chain 3

16S rRNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain P

30S ribosomal protein S11

Chain Z

30S ribosomal protein S21