3D structure

PDB id
7ST2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GAAA*UC
Length
6 nucleotides
Bulged bases
7ST2|1|1|A|1088
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ST2_185 not in the Motif Atlas
Homologous match to IL_5J7L_385
Geometric discrepancy: 0.3968
The information below is about IL_5J7L_385
Detailed Annotation
Major groove platform
Broad Annotation
No text annotation
Motif group
IL_48076.6
Basepair signature
cWW-cSH-cWW
Number of instances in this motif group
41

Unit IDs

7ST2|1|1|G|1087
7ST2|1|1|A|1088
7ST2|1|1|A|1089
7ST2|1|1|A|1090
*
7ST2|1|1|U|1101
7ST2|1|1|C|1102

Current chains

Chain 1
23S rRNA

Nearby chains

Chain F
50S ribosomal protein L36
Chain h
50S ribosomal protein L10
Chain i
50S ribosomal protein L11

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2822 s