IL_7ST6_091

3D structure

PDB id

7ST6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation, non-rotated 70S ribosome (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUC*GCGAG

Length

8 nucleotides

Bulged bases

7ST6|1|1|G|2576, 7ST6|1|1|A|2577

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ST6_091 not in the Motif Atlas

Homologous match to IL_7A0S_089

Geometric discrepancy: 0.1611

The information below is about IL_7A0S_089

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_68118.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

29

Unit IDs

7ST6|1|1|C|2510
7ST6|1|1|U|2511
7ST6|1|1|C|2512
*
7ST6|1|1|G|2574
7ST6|1|1|C|2575
7ST6|1|1|G|2576
7ST6|1|1|A|2577
7ST6|1|1|G|2578

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L32

Chain c

50S ribosomal protein L3