IL_7ST6_099

3D structure

PDB id

7ST6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation, non-rotated 70S ribosome (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUG*CACUG

Length

8 nucleotides

Bulged bases

7ST6|1|1|C|2712, 7ST6|1|1|U|2713

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ST6_099 not in the Motif Atlas

Geometric match to IL_5VSU_002

Geometric discrepancy: 0.2924

The information below is about IL_5VSU_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_73028.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

5

Unit IDs

7ST6|1|1|U|2695
7ST6|1|1|U|2696
7ST6|1|1|G|2697
*
7ST6|1|1|C|2710
7ST6|1|1|A|2711
7ST6|1|1|C|2712
7ST6|1|1|U|2713
7ST6|1|1|G|2714

Current chains

Chain 1

23S rRNA

Nearby chains

Chain n

50S ribosomal protein L17

Chain p

50S ribosomal protein L19