IL_7ST6_185

3D structure

PDB id

7ST6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation, non-rotated 70S ribosome (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUG*UGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ST6_185 not in the Motif Atlas

Geometric match to IL_5E81_401

Geometric discrepancy: 0.2569

The information below is about IL_5E81_401

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42997.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

23

Unit IDs

7ST6|1|1|U|2098
7ST6|1|1|U|2099
7ST6|1|1|G|2100
*
7ST6|1|1|U|2189
7ST6|1|1|G|2190
7ST6|1|1|A|2191

Current chains

Chain 1

23S rRNA

Nearby chains

Chain g

50S ribosomal protein L9