IL_7ST6_188

3D structure

PDB id

7ST6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation, non-rotated 70S ribosome (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUCU*GGG

Length

7 nucleotides

Bulged bases

7ST6|1|1|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ST6_188 not in the Motif Atlas

Geometric match to IL_8C3A_120

Geometric discrepancy: 0.3178

The information below is about IL_8C3A_120

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

7ST6|1|1|U|2401
7ST6|1|1|U|2402
7ST6|1|1|C|2403
7ST6|1|1|U|2404
*
7ST6|1|1|G|2413
7ST6|1|1|G|2414
7ST6|1|1|G|2415

Current chains

Chain 1

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L33

Chain E

50S ribosomal protein L35

Chain l

50S ribosomal protein L15