IL_7ST6_200

3D structure

PDB id

7ST6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation, non-rotated 70S ribosome (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ST6_200 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2865

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7ST6|1|1|C|274
7ST6|1|1|C|275
7ST6|1|1|U|276
7ST6|1|1|G|277
7ST6|1|1|A|278
7ST6|1|1|A|279
7ST6|1|1|U|280
7ST6|1|1|C|281
*
7ST6|1|1|G|359
7ST6|1|1|U|360
7ST6|1|1|G|361
7ST6|1|1|A|362
7ST6|1|1|G|363

Current chains

Chain 1

23S rRNA

Nearby chains