IL_7ST6_209
3D structure
- PDB id
- 7ST6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation, non-rotated 70S ribosome (Structure I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AGAAU*GGAAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ST6_209 not in the Motif Atlas
- Homologous match to IL_4LFB_065
- Geometric discrepancy: 0.0792
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
7ST6|1|3|A|673
7ST6|1|3|G|674
7ST6|1|3|A|675
7ST6|1|3|A|676
7ST6|1|3|U|677
*
7ST6|1|3|G|713
7ST6|1|3|G|714
7ST6|1|3|A|715
7ST6|1|3|A|716
7ST6|1|3|U|717
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain K
- 30S ribosomal protein S6
- Chain P
- 30S ribosomal protein S11
- Chain W
- 30S ribosomal protein S18
- Chain Z
- 30S ribosomal protein S21
- Chain b
- 50S ribosomal protein L2
Coloring options: