IL_7ST7_139

3D structure

PDB id

7ST7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUGAAAUCC*GAACUGC

Length

16 nucleotides

Bulged bases

7ST7|1|3|U|632

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ST7|1|3|G|604
7ST7|1|3|U|605
7ST7|1|3|G|606
7ST7|1|3|A|607
7ST7|1|3|A|608
7ST7|1|3|A|609
7ST7|1|3|U|610
7ST7|1|3|C|611
7ST7|1|3|C|612
*
7ST7|1|3|G|628
7ST7|1|3|A|629
7ST7|1|3|A|630
7ST7|1|3|C|631
7ST7|1|3|U|632
7ST7|1|3|G|633
7ST7|1|3|C|634

Current chains

Chain 3

16S rRNA

Nearby chains

Chain I

30S ribosomal protein S4

Chain M

30S ribosomal protein S8

Chain U

30S ribosomal protein S16

Chain V

30S ribosomal protein S17