IL_7ST7_190
3D structure
- PDB id
- 7ST7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUGGGAGGCUUUGAAGUG*UGGAGCCGACCUUGAAAUACCAC
- Length
- 41 nucleotides
- Bulged bases
- 7ST7|1|1|U|2131, 7ST7|1|1|U|2132, 7ST7|1|1|A|2158, 7ST7|1|1|A|2171, 7ST7|1|1|U|2172
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ST7|1|1|G|2121
7ST7|1|1|U|2122
7ST7|1|1|G|2123
7ST7|1|1|G|2124
7ST7|1|1|G|2125
7ST7|1|1|A|2126
7ST7|1|1|G|2127
7ST7|1|1|G|2128
7ST7|1|1|C|2129
7ST7|1|1|U|2130
7ST7|1|1|U|2131
7ST7|1|1|U|2132
7ST7|1|1|G|2133
7ST7|1|1|A|2134
7ST7|1|1|A|2135
7ST7|1|1|G|2136
7ST7|1|1|U|2137
7ST7|1|1|G|2138
*
7ST7|1|1|U|2155
7ST7|1|1|G|2156
7ST7|1|1|G|2157
7ST7|1|1|A|2158
7ST7|1|1|G|2159
7ST7|1|1|C|2160
7ST7|1|1|C|2161
7ST7|1|1|G|2162
7ST7|1|1|A|2163
7ST7|1|1|C|2164
7ST7|1|1|C|2165
7ST7|1|1|U|2166
7ST7|1|1|U|2167
7ST7|1|1|G|2168
7ST7|1|1|A|2169
7ST7|1|1|A|2170
7ST7|1|1|A|2171
7ST7|1|1|U|2172
7ST7|1|1|A|2173
7ST7|1|1|C|2174
7ST7|1|1|C|2175
7ST7|1|1|A|2176
7ST7|1|1|C|2177
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain a
- 50S ribosomal protein L1
Coloring options: