IL_7ST7_191

3D structure

PDB id

7ST7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUGGA*UCUGCAU

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ST7|1|1|G|2138
7ST7|1|1|U|2139
7ST7|1|1|G|2140
7ST7|1|1|G|2141
7ST7|1|1|A|2142
*
7ST7|1|1|U|2149
7ST7|1|1|C|2150
7ST7|1|1|U|2151
7ST7|1|1|G|2152
7ST7|1|1|C|2153
7ST7|1|1|A|2154
7ST7|1|1|U|2155

Current chains

Chain 1

23S rRNA

Nearby chains

Chain L

30S ribosomal protein S7

Chain P

30S ribosomal protein S11

Chain a

50S ribosomal protein L1