IL_7ST7_193

3D structure

PDB id

7ST7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAUA*UGUUUG

Length

11 nucleotides

Bulged bases

7ST7|1|1|U|2491

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ST7|1|1|U|2457
7ST7|1|1|G|2458
7ST7|1|1|A|2459
7ST7|1|1|U|2460
7ST7|1|1|A|2461
*
7ST7|1|1|U|2489
7ST7|1|1|G|2490
7ST7|1|1|U|2491
7ST7|1|1|U|2492
7ST7|1|1|U|2493
7ST7|1|1|G|2494

Current chains

Chain 1

23S rRNA

Nearby chains

Chain m

50S ribosomal protein L16