IL_7ST7_197

3D structure

PDB id

7ST7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGCA*UUCCCG

Length

10 nucleotides

Bulged bases

7ST7|1|3|C|934, 7ST7|1|3|U|1381

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ST7|1|3|C|932
7ST7|1|3|G|933
7ST7|1|3|C|934
7ST7|1|3|A|935
*
7ST7|1|3|U|1380
7ST7|1|3|U|1381
7ST7|1|3|C|1382
7ST7|1|3|C|1383
7ST7|1|3|C|1384
7ST7|1|3|G|1385

Current chains

Chain 3

16S rRNA

Nearby chains

Chain 4

mRNA

Chain 6

Transfer RNA; tRNA

Chain L

30S ribosomal protein S7

Chain N

30S ribosomal protein S9