IL_7ST7_200

3D structure

PDB id

7ST7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAAGC*GCGGACC

Length

12 nucleotides

Bulged bases

7ST7|1|3|A|1257, 7ST7|1|3|G|1278, 7ST7|1|3|A|1280, 7ST7|1|3|C|1281

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ST7|1|3|G|1255
7ST7|1|3|A|1256
7ST7|1|3|A|1257
7ST7|1|3|G|1258
7ST7|1|3|C|1259
*
7ST7|1|3|G|1276
7ST7|1|3|C|1277
7ST7|1|3|G|1278
7ST7|1|3|G|1279
7ST7|1|3|A|1280
7ST7|1|3|C|1281
7ST7|1|3|C|1282

Current chains

Chain 3

16S rRNA

Nearby chains

Chain H

30S ribosomal protein S3

Chain O

30S ribosomal protein S10

Chain S

30S ribosomal protein S14