IL_7SYP_082

3D structure

PDB id

7SYP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the wt IRES and 40S ribosome binary complex, open conformation. Structure 10(wt)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUACCGAU*AGAGGAAG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SYP|1|2|C|1713
7SYP|1|2|U|1714
7SYP|1|2|A|1715
7SYP|1|2|C|1716
7SYP|1|2|C|1717
7SYP|1|2|G|1718
7SYP|1|2|A|1719
7SYP|1|2|U|1720
*
7SYP|1|2|A|1813
7SYP|1|2|G|1814
7SYP|1|2|A|1815
7SYP|1|2|G|1816
7SYP|1|2|G|1817
7SYP|1|2|A|1818
7SYP|1|2|A|1819
7SYP|1|2|G|1820

Current chains

Chain 2

18S rRNA

Nearby chains

Chain Y

uS12

Chain n

eL41