IL_7SYQ_052

3D structure

PDB id

7SYQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the wt IRES and 40S ribosome ternary complex, open conformation. Structure 11(wt)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAGGUUC*GUUCC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SYQ|1|2|G|1040
7SYQ|1|2|G|1041
7SYQ|1|2|A|1042
7SYQ|1|2|G|1043
7SYQ|1|2|G|1044
7SYQ|1|2|U|1045
7SYQ|1|2|U|1046
7SYQ|1|2|C|1047
*
7SYQ|1|2|G|1071
7SYQ|1|2|U|1072
7SYQ|1|2|U|1073
7SYQ|1|2|C|1074
7SYQ|1|2|C|1075

Current chains

Chain 2

18S rRNA

Nearby chains

Chain O

uS15

Chain P

uS11

Chain b

eS26