IL_7SYQ_113
3D structure
- PDB id
- 7SYQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the wt IRES and 40S ribosome ternary complex, open conformation. Structure 11(wt)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GCCC*GUC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SYQ_113 not in the Motif Atlas
- Geometric match to IL_4N0T_004
- Geometric discrepancy: 0.304
- The information below is about IL_4N0T_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_99358.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
7SYQ|1|2|G|1270
7SYQ|1|2|C|1271
7SYQ|1|2|C|1272
7SYQ|1|2|C|1273
*
7SYQ|1|2|G|1510
7SYQ|1|2|U|1511
7SYQ|1|2|C|1512
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain L
- eS10
- Chain e
- uS14
- Chain g
- eS31
Coloring options: