IL_7SYR_012

3D structure

PDB id

7SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the wt IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(wt).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GACUU*AUGCCGAC

Length

13 nucleotides

Bulged bases

7SYR|1|2|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SYR|1|2|G|130
7SYR|1|2|A|141
7SYR|1|2|C|142
7SYR|1|2|U|143
7SYR|1|2|U|144
*
7SYR|1|2|A|175
7SYR|1|2|U|176
7SYR|1|2|G|177
7SYR|1|2|C|178
7SYR|1|2|C|179
7SYR|1|2|G|180
7SYR|1|2|A|181
7SYR|1|2|C|182

Current chains

Chain 2

18S rRNA

Nearby chains

Chain H

eS6