IL_7SYR_066

3D structure

PDB id

7SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the wt IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(wt).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AUUGACAG*CUUUCUCGAU

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SYR|1|2|A|1287
7SYR|1|2|U|1288
7SYR|1|2|U|1289
7SYR|1|2|G|1290
7SYR|1|2|A|1291
7SYR|1|2|C|1292
7SYR|1|2|A|1293
7SYR|1|2|G|1294
*
7SYR|1|2|C|1305
7SYR|1|2|U|1306
7SYR|1|2|U|1307
7SYR|1|2|U|1308
7SYR|1|2|C|1309
7SYR|1|2|U|1310
7SYR|1|2|C|1311
7SYR|1|2|G|1312
7SYR|1|2|A|1313
7SYR|1|2|U|1314

Current chains

Chain 2

18S rRNA

Nearby chains

Chain L

eS10

Chain N

eS12

Chain Q

uS19

Chain e

uS14

Chain g

eS31