IL_7SYR_099

3D structure

PDB id

7SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the wt IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(wt).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAUUU*AACCUCGGG

Length

14 nucleotides

Bulged bases

7SYR|1|2|U|305, 7SYR|1|2|G|307

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SYR|1|2|C|216
7SYR|1|2|A|217
7SYR|1|2|U|218
7SYR|1|2|U|219
7SYR|1|2|U|220
*
7SYR|1|2|A|301
7SYR|1|2|A|302
7SYR|1|2|C|303
7SYR|1|2|C|304
7SYR|1|2|U|305
7SYR|1|2|C|306
7SYR|1|2|G|307
7SYR|1|2|G|308
7SYR|1|2|G|309

Current chains

Chain 2

18S rRNA

Nearby chains

Chain F

eS4 (S4 X isoform)

Chain J

eS8