IL_7SYS_084

3D structure

PDB id

7SYS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the delta dII IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(delta dII).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UACCGAU*AGAGGAA

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SYS|1|2|U|1714
7SYS|1|2|A|1715
7SYS|1|2|C|1716
7SYS|1|2|C|1717
7SYS|1|2|G|1718
7SYS|1|2|A|1719
7SYS|1|2|U|1720
*
7SYS|1|2|A|1813
7SYS|1|2|G|1814
7SYS|1|2|A|1815
7SYS|1|2|G|1816
7SYS|1|2|G|1817
7SYS|1|2|A|1818
7SYS|1|2|A|1819

Current chains

Chain 2

18S rRNA

Nearby chains

Chain Y

uS12

Chain n

eL41