IL_7SYT_102

3D structure

PDB id

7SYT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the wt IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(wt)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

GAGGUUC*GUUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SYT|1|2|G|1041
7SYT|1|2|A|1042
7SYT|1|2|G|1043
7SYT|1|2|G|1044
7SYT|1|2|U|1045
7SYT|1|2|U|1046
7SYT|1|2|C|1047
*
7SYT|1|2|G|1071
7SYT|1|2|U|1072
7SYT|1|2|U|1073
7SYT|1|2|C|1074

Current chains

Chain 2

18S rRNA

Nearby chains

Chain O

uS15

Chain P

uS11

Chain b

eS26 (S26)