IL_7SYU_102

3D structure

PDB id

7SYU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the delta dII IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(delta dII)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GACAGGAUUGACAG*CUUUCUCGAUUC

Length

26 nucleotides

Bulged bases

7SYU|1|2|G|1285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SYU|1|2|G|1281
7SYU|1|2|A|1282
7SYU|1|2|C|1283
7SYU|1|2|A|1284
7SYU|1|2|G|1285
7SYU|1|2|G|1286
7SYU|1|2|A|1287
7SYU|1|2|U|1288
7SYU|1|2|U|1289
7SYU|1|2|G|1290
7SYU|1|2|A|1291
7SYU|1|2|C|1292
7SYU|1|2|A|1293
7SYU|1|2|G|1294
*
7SYU|1|2|C|1305
7SYU|1|2|U|1306
7SYU|1|2|U|1307
7SYU|1|2|U|1308
7SYU|1|2|C|1309
7SYU|1|2|U|1310
7SYU|1|2|C|1311
7SYU|1|2|G|1312
7SYU|1|2|A|1313
7SYU|1|2|U|1314
7SYU|1|2|U|1315
7SYU|1|2|C|1316

Current chains

Chain 2

18S rRNA

Nearby chains

Chain L

eS10

Chain N

eS12

Chain Q

uS19

Chain e

eS29

Chain g

40S ribosomal protein S27a