IL_7TM3_065
3D structure
- PDB id
- 7TM3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome stalled on a 2-TMD Rhodopsin intermediate in complex with the multipass translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.25 Å
Loop
- Sequence
- CGC*GG
- Length
- 5 nucleotides
- Bulged bases
- 7TM3|1|K|G|1815
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TM3_065 not in the Motif Atlas
- Geometric match to IL_4V88_442
- Geometric discrepancy: 0.3262
- The information below is about IL_4V88_442
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 49
Unit IDs
7TM3|1|K|C|1814
7TM3|1|K|G|1815
7TM3|1|K|C|1816
*
7TM3|1|K|G|1823
7TM3|1|K|G|1824
Current chains
- Chain K
- 28S ribosomal RNA
Nearby chains
- Chain D
- Ribosomal_L18_c domain-containing protein
- Chain T
- eL21
- Chain b
- eL29
Coloring options: