IL_7TM3_165

3D structure

PDB id

7TM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit 80S ribosome stalled on a 2-TMD Rhodopsin intermediate in complex with the multipass translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.25 Å

Loop

Sequence

CGCUG*CGGGCGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TM3|1|K|C|1097
7TM3|1|K|G|1098
7TM3|1|K|C|1099
7TM3|1|K|U|1100
7TM3|1|K|G|1168
*
7TM3|1|K|C|1193
7TM3|1|K|G|1194
7TM3|1|K|G|1195
7TM3|1|K|G|1196
7TM3|1|K|C|1197
7TM3|1|K|G|1198
7TM3|1|K|G|1199

Current chains

Chain K

28S ribosomal RNA

Nearby chains

Chain S

eL20

Chain T

eL21