IL_7TOO_037
3D structure
- PDB id
- 7TOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AGU*AU
- Length
- 5 nucleotides
- Bulged bases
- 7TOO|1|A25S|G|984
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOO_037 not in the Motif Atlas
- Homologous match to IL_8C3A_040
- Geometric discrepancy: 0.1186
- The information below is about IL_8C3A_040
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 49
Unit IDs
7TOO|1|A25S|A|983
7TOO|1|A25S|G|984
7TOO|1|A25S|U|985
*
7TOO|1|A25S|A|1099
7TOO|1|A25S|U|1100
Current chains
- Chain A25S
- 25S rRNA
Nearby chains
- Chain AL07
- 60S ribosomal protein L7-A
- Chain AL18
- 60S ribosomal protein L18-A
- Chain AL21
- 60S ribosomal protein L21-A
- Chain AL29
- RPL29 isoform 1
Coloring options: