IL_7TOO_095

3D structure

PDB id

7TOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAUAGA*UUUAUAG

Length

13 nucleotides

Bulged bases

7TOO|1|A25S|U|2498, 7TOO|1|A25S|A|2502

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOO|1|A25S|C|2444
7TOO|1|A25S|A|2445
7TOO|1|A25S|U|2446
7TOO|1|A25S|A|2447
7TOO|1|A25S|G|2448
7TOO|1|A25S|A|2449
*
7TOO|1|A25S|U|2497
7TOO|1|A25S|U|2498
7TOO|1|A25S|U|2499
7TOO|1|A25S|A|2500
7TOO|1|A25S|U|2501
7TOO|1|A25S|A|2502
7TOO|1|A25S|G|2503

Current chains

Chain A25S

25S rRNA

Nearby chains

Chain AL36

60S ribosomal protein L36-A

Chain APTN

Transfer RNA; tRNA