IL_7TOO_101
3D structure
- PDB id
- 7TOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUCC*GC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOO_101 not in the Motif Atlas
- Homologous match to IL_8C3A_110
- Geometric discrepancy: 0.1556
- The information below is about IL_8C3A_110
- Detailed Annotation
- Single stack bend
- Broad Annotation
- Single stack bend
- Motif group
- IL_39137.1
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
7TOO|1|A25S|G|2770
7TOO|1|A25S|U|2771
7TOO|1|A25S|C|2772
7TOO|1|A25S|C|2773
*
7TOO|1|A25S|G|2787
7TOO|1|A25S|C|2788
Current chains
- Chain A25S
- 25S rRNA
Nearby chains
- Chain AL13
- 60S ribosomal protein L13-A
- Chain AL18
- 60S ribosomal protein L18-A
- Chain AL28
- 60S ribosomal protein L28
- Chain AL42
- 60S ribosomal protein L42-A
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