IL_7TOO_149
3D structure
- PDB id
- 7TOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UUU*AGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOO_149 not in the Motif Atlas
- Homologous match to IL_8C3A_050
- Geometric discrepancy: 0.1052
- The information below is about IL_8C3A_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
7TOO|1|A25S|U|1123
7TOO|1|A25S|U|1124
7TOO|1|A25S|U|1125
*
7TOO|1|A25S|A|1133
7TOO|1|A25S|G|1134
7TOO|1|A25S|A|1135
Current chains
- Chain A25S
- 25S rRNA
Nearby chains
- Chain A5S
- 5S ribosomal RNA; 5S rRNA
- Chain AL10
- RPL10 isoform 1
- Chain AL21
- 60S ribosomal protein L21-A
- Chain AL29
- RPL29 isoform 1
Coloring options: