IL_7TOO_155

3D structure

PDB id

7TOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGGUGUAGAAUAAGUG*CACUACC

Length

23 nucleotides

Bulged bases

7TOO|1|A25S|A|2458, 7TOO|1|A25S|A|2459, 7TOO|1|A25S|U|2460

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOO|1|A25S|G|2450
7TOO|1|A25S|G|2451
7TOO|1|A25S|G|2452
7TOO|1|A25S|U|2453
7TOO|1|A25S|G|2454
7TOO|1|A25S|U|2455
7TOO|1|A25S|A|2456
7TOO|1|A25S|G|2457
7TOO|1|A25S|A|2458
7TOO|1|A25S|A|2459
7TOO|1|A25S|U|2460
7TOO|1|A25S|A|2461
7TOO|1|A25S|A|2462
7TOO|1|A25S|G|2463
7TOO|1|A25S|U|2464
7TOO|1|A25S|G|2465
*
7TOO|1|A25S|C|2490
7TOO|1|A25S|A|2491
7TOO|1|A25S|C|2492
7TOO|1|A25S|U|2493
7TOO|1|A25S|A|2494
7TOO|1|A25S|C|2495
7TOO|1|A25S|C|2496

Current chains

Chain A25S

25S rRNA

Nearby chains

Chain APTN

Transfer RNA; tRNA