IL_7TOP_017
3D structure
- PDB id
- 7TOP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- AGACAGGC*GCAUAAU
- Length
- 15 nucleotides
- Bulged bases
- 7TOP|1|A25S|A|440
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TOP|1|A25S|A|436
7TOP|1|A25S|G|437
7TOP|1|A25S|A|438
7TOP|1|A25S|C|439
7TOP|1|A25S|A|440
7TOP|1|A25S|G|494
7TOP|1|A25S|G|495
7TOP|1|A25S|C|496
*
7TOP|1|A25S|G|617
7TOP|1|A25S|C|618
7TOP|1|A25S|A|619
7TOP|1|A25S|U|620
7TOP|1|A25S|A|621
7TOP|1|A25S|A|622
7TOP|1|A25S|U|623
Current chains
- Chain A25S
- 25S rRNA
Nearby chains
- Chain AL06
- 60S ribosomal protein L6-A
- Chain AL17
- 60S ribosomal protein L17-A
- Chain AL32
- RPL32 isoform 1
- Chain AL33
- 60S ribosomal protein L33-A
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